Difference between revisions of "RXN-17252"

Latest revision as of 10:38, 27 June 2019

Reaction RXN-17252

• direction:
  • LEFT-TO-RIGHT
• common name:
  • pheophorbide a oxygenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 2 Reduced-ferredoxins[c] + 1 CPD-7061[c] + 1 OXYGEN-MOLECULE[c] + 2 PROTON[c] => 1 CPD-18666[c] + 1 WATER[c] + 2 Oxidized-ferredoxins[c]
• With common name(s):
  • 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 1 pheophorbide a[c] + 1 oxygen[c] + 2 H+[c] => 1 epoxypheophorbide a[c] + 1 H2O[c] + 2 an oxidized ferredoxin [iron-sulfur] cluster[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g14625.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: g3338.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g4277.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18954.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g18953.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6927, chlorophyll a degradation II: PWY-6927
  • 2 reactions found over 5 reactions in the full pathway
• PWY-5098, chlorophyll a degradation I: PWY-5098
  • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• RHEA:
  • 48161