Difference between revisions of "RXN-17918"

Latest revision as of 11:39, 27 June 2019

Reaction RXN-17918

• direction:
  • LEFT-TO-RIGHT
• common name:
  • DNA ligase (ATP)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 DNA-Ligase-L-lysine-adenylate[c] + 1 5-Phospho-terminated-DNAs[c] + 2 PROTON[c] => 1 A-5-prime-PP-5-prime-DNA[c] + 1 DNA-Ligase-L-lysine[c]
• With common name(s):
  • 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] + 1 a 5'-phospho-[DNA][c] + 2 H+[c] => 1 an adenosine-5'-diphospho-5'-[DNA][c] + 1 a [DNA ligase]-L-lysine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g19123.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6926.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16715.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g4918.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16056.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g19122.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6927.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16715.t1
  • Source: orthology-saccharina_japonica

Pathways

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links