Difference between revisions of "RXN0-5398"

Latest revision as of 11:39, 27 June 2019

Reaction RXN0-5398

• ec number:
  • EC-4.2.1.70
• direction:
  • REVERSIBLE
• common name:
  • pseudouridine-5'-phosphate glycosidase
  • pseudouridylate synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-15317[c] + 1 URACIL[c] <=> 1 WATER[c] + 1 PSEUDOURIDINE-5-P[c]
• With common name(s):
  • 1 D-ribofuranose 5-phosphate[c] + 1 uracil[c] <=> 1 H2O[c] + 1 pseudouridine 5'-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g13914.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g14079.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM

Pathways

• PWY-6019, pseudouridine degradation: PWY-6019
  • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • Q9JWF1
  • Q9JTX5
  • Q9PPJ9
  • Q9CGH0
  • Q9CI80
  • Q9JX44
  • Q9V1A5
  • Q9PP96
  • Q9PN18
  • Q9PJ89
  • Q9PNJ2
  • Q9PLW9
• RHEA:
  • 18340
• LIGAND-RXN:
  • R01055