Difference between revisions of "DXS-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXS-RXN DXS-RXN] == * ec number: ** [http://enzyme.expasy.org/EC/2.2.1.7 EC-2.2.1.7] * direction: *...") |
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Latest revision as of 10:39, 27 June 2019
Contents
Reaction DXS-RXN
- ec number:
- direction:
- LEFT-TO-RIGHT
- common name:
- 1-deoxy-D-xylulose-5-phosphate synthase
- 1-deoxyxylulose-5-phosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 PYRUVATE[c] + 1 GAP[c] => 1 DEOXYXYLULOSE-5P[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 pyruvate[c] + 1 D-glyceraldehyde 3-phosphate[c] => 1 1-deoxy-D-xylulose 5-phosphate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g7003.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g14829.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
Pathways
- PWY-7560, methylerythritol phosphate pathway II: PWY-7560
- 8 reactions found over 9 reactions in the full pathway
- PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
- 4 reactions found over 7 reactions in the full pathway
- PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
- 5 reactions found over 7 reactions in the full pathway
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
- 3 reactions found over 8 reactions in the full pathway
- NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
- 8 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-saccharina_japonica
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
External links
