Difference between revisions of "RXN-13444"

Latest revision as of 10:40, 27 June 2019

Reaction RXN-13444

• ec number:
  • EC-4.2.1.134
• direction:
  • LEFT-TO-RIGHT
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-14424[c] => 1 CPD-14425[c] + 1 WATER[c]
• With common name(s):
  • 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] => 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g8153.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16356.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
  • 3 reactions found over 7 reactions in the full pathway
• PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
  • 8 reactions found over 14 reactions in the full pathway
• PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
  • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links