Difference between revisions of "DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN"

Latest revision as of 10:40, 27 June 2019

Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN

• ec number:
  • EC-4.1.1.33
• direction:
  • LEFT-TO-RIGHT
• common name:
  • diphosphomevalonate decarboxylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-641[c] + 1 ATP[c] => 1 DELTA3-ISOPENTENYL-PP[c] + 1 CARBON-DIOXIDE[c] + 1 ADP[c] + 1 Pi[c]
• With common name(s):
  • 1 (R)-mevalonate diphosphate[c] + 1 ATP[c] => 1 isopentenyl diphosphate[c] + 1 CO2[c] + 1 ADP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g12830.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g12830.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• PWY-922, mevalonate pathway I: PWY-922
  • 7 reactions found over 7 reactions in the full pathway
• PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
  • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• UNIPROT:
  • P32377
  • Q9U2A1
  • Q9U294
  • O13963
  • Q9M381
  • O23722
• RHEA:
  • 23733
• LIGAND-RXN:
  • R01121