Difference between revisions of "AGMATIN-RXN"

Latest revision as of 10:40, 27 June 2019

Reaction AGMATIN-RXN

• ec number:
  • EC-3.5.3.11
• direction:
  • LEFT-TO-RIGHT
• common name:
  • agmatinase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 WATER[c] + 1 AGMATHINE[c] => 1 UREA[c] + 1 PUTRESCINE[c]
• With common name(s):
  • 1 H2O[c] + 1 agmatine[c] => 1 urea[c] + 1 putrescine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g11320.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g12020.t1
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-6305, putrescine biosynthesis IV: PWY-6305
  • 4 reactions found over 4 reactions in the full pathway
• PWY0-823, L-arginine degradation III (arginine decarboxylase/agmatinase pathway): PWY0-823
  • 2 reactions found over 2 reactions in the full pathway
• PWY-40, putrescine biosynthesis I: PWY-40
  • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P60654
  • P60653
  • P60651
  • Q57757
  • P73270
• RHEA:
  • 13929
• LIGAND-RXN:
  • R01157