Difference between revisions of "RXN0-882"

Latest revision as of 10:40, 27 June 2019

Reaction RXN0-882

• ec number:
  • EC-1.17.7.1
• direction:
  • LEFT-TO-RIGHT
• common name:
  • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE[c] + 2 Reduced-ferredoxins[c] + 1 PROTON[c] => 1 HYDROXY-METHYL-BUTENYL-DIP[c] + 2 Oxidized-ferredoxins[c] + 1 WATER[c]
• With common name(s):
  • 1 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 1 H+[c] => 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] + 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g13905.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g9095.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM

Pathways

• PWY-7560, methylerythritol phosphate pathway II: PWY-7560
  • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 26121
• LIGAND-RXN:
  • R08689