Difference between revisions of "RXN1F-20"

Latest revision as of 10:41, 27 June 2019

Reaction RXN1F-20

• ec number:
  • EC-6.6.1.1
• direction:
  • LEFT-TO-RIGHT
• common name:
  • magnesium chelatase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 ATP[c] + 1 PROTOPORPHYRIN_IX[c] + 1 MG+2[c] + 1 WATER[c] => 3 PROTON[c] + 1 MG-PROTOPORPHYRIN[c] + 1 Pi[c] + 1 ADP[c]
• With common name(s):
  • 1 ATP[c] + 1 protoporphyrin IX[c] + 1 Mg2+[c] + 1 H2O[c] => 3 H+[c] + 1 Mg-protoporphyrin[c] + 1 phosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g10157.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g4586.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g5618.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g5803.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
  • 5 reactions found over 9 reactions in the full pathway
• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 4 reactions found over 9 reactions in the full pathway
• CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
  • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 13962
• LIGAND-RXN:
  • R03877