Difference between revisions of "PPGPPSYN-RXN"

Latest revision as of 11:42, 27 June 2019

Reaction PPGPPSYN-RXN

• ec number:
  • EC-3.1.7.2
• direction:
  • LEFT-TO-RIGHT
• common name:
  • guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 GUANOSINE-5DP-3DP[c] + 1 WATER[c] => 1 PROTON[c] + 1 PPI[c] + 1 GDP[c]
• With common name(s):
  • 1 ppGpp[c] + 1 H2O[c] => 1 H+[c] + 1 diphosphate[c] + 1 GDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g17342.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g14627.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g17342.t1
  • Source: orthology-saccharina_japonica
• Gene: g5521.t1
  • Source: orthology-saccharina_japonica
• Gene: g3374.t1
  • Source: orthology-saccharina_japonica

Pathways

• PPGPPMET-PWY, ppGpp biosynthesis: PPGPPMET-PWY
  • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links

• UNIPROT:
  • Q9PN26
  • Q9JT97
  • P43811
  • P0AG24
• RHEA:
  • 14254
• LIGAND-RXN:
  • R00336