Difference between revisions of "MALIC-NADP-RXN"

Latest revision as of 10:42, 27 June 2019

Reaction MALIC-NADP-RXN

• ec number:
  • EC-1.1.1.40
• direction:
  • LEFT-TO-RIGHT
• common name:
  • oxaloacetate decarboxylase
  • malate dehydrogenase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 MAL[c] + 1 NADP[c] => 1 NADPH[c] + 1 CARBON-DIOXIDE[c] + 1 PYRUVATE[c]
• With common name(s):
  • 1 (S)-malate[c] + 1 NADP+[c] => 1 NADPH[c] + 1 CO2[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g8130.t1
  • Source: orthology-saccharina_japonica
• Gene: g9346.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g5462.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g10342.t1
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g10342.t2
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
  • 12 reactions found over 13 reactions in the full pathway
• PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
  • 10 reactions found over 10 reactions in the full pathway
• PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
  • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P12628
  • P06801
  • P13697
  • P16243
  • O48656
  • P22178
  • P93139
  • P34105
  • P28227
  • P36444
  • P40927
  • P37223
  • P48163
  • Q16798
  • O50015
  • O04935
  • O04936
  • P37222
  • Q42888
  • Q42889
• RHEA:
  • 18254
• LIGAND-RXN:
  • R00216