Difference between revisions of "RXN0-5180"

Latest revision as of 10:42, 27 June 2019

Reaction RXN0-5180

• ec number:
  • EC-2.5.1
• direction:
  • LEFT-TO-RIGHT
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 FARNESYL-PP[c] + 1 DELTA3-ISOPENTENYL-PP[c] => 1 CPD0-1028[c] + 1 PPI[c]
• With common name(s):
  • 1 (2E,6E)-farnesyl diphosphate[c] + 1 isopentenyl diphosphate[c] => 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g13469.t1
  • Source: orthology-arabidopsis_thaliana
• Gene: g6290.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g3782.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g6666.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18026.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7849.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5815, rubber biosynthesis: PWY-5815
  • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• RHEA:
  • 31282
• LIGAND-RXN:
  • R05555