Difference between revisions of "RXN-11474"

Latest revision as of 11:46, 27 June 2019

Reaction RXN-11474

• ec number:
  • EC-2.3.1.179
  • EC-2.3.1.41
• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-oxo-glutaryl-[acp] methyl ester synthase
  • 3-oxoacyl-[acyl-carrier-protein] synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Malonyl-acp-methyl-ester[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] => 1 3-Ketoglutaryl-ACP-methyl-ester[c] + 1 CARBON-DIOXIDE[c] + 1 ACP[c]
• With common name(s):
  • 1 a malonyl-[acp] methyl ester[c] + 1 a malonyl-[acp][c] + 1 H+[c] => 1 a 3-oxo-glutaryl-[acp] methyl ester[c] + 1 CO2[c] + 1 a holo-[acyl-carrier protein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g5720.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g9383.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16194.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g4145.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11727.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g11727.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9384.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
  • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links