Difference between revisions of "RXN-12177"

Latest revision as of 10:47, 27 June 2019

Reaction RXN-12177

• ec number:
  • EC-3.2.1.180
• direction:
  • LEFT-TO-RIGHT
• common name:
  • unsaturated chondroitin 6-sulfate disaccharide hydrolase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 4-DEOXY-BETA-D-GLUC-4-ENURONOSYL-6S[c] + 1 WATER[c] => 1 CPD-13122[c] + 1 CPD-12565[c]
• With common name(s):
  • 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate[c] + 1 H2O[c] => 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] + 1 N-acetyl-D-galactosamine 6-O-sulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g7658.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7658.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7658.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-6572, chondroitin sulfate degradation I (bacterial): PWY-6572
  • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph

External links

• RHEA:
  • 31650
• LIGAND-RXN:
  • R10867