Difference between revisions of "RXN0-722"

Latest revision as of 11:47, 27 June 2019

Reaction RXN0-722

• ec number:
  • EC-1.17.4.1
• direction:
  • LEFT-TO-RIGHT
• common name:
  • ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
  • 2'-deoxyuridine 5'-diphosphate:oxidized NrdH glutaredoxin-like protein oxidoreductase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 UDP[c] + 1 Reduced-NrdH-Proteins[c] => 1 DUDP[c] + 1 Oxidized-NrdH-Proteins[c] + 1 WATER[c]
• With common name(s):
  • 1 UDP[c] + 1 a reduced NrdH glutaredoxin-like protein[c] => 1 dUDP[c] + 1 an oxidized NrdH glutaredoxin-like protein[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g16066.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16942.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16067.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g11272.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16083.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g3870.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3960.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g3959.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16942.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
  • 14 reactions found over 17 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links