Difference between revisions of "SAMDECARB-RXN"

Latest revision as of 10:48, 27 June 2019

Reaction SAMDECARB-RXN

• ec number:
  • EC-4.1.1.50
• direction:
  • LEFT-TO-RIGHT
• common name:
  • adenosylmethionine decarboxylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 S-ADENOSYLMETHIONINE[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 S-ADENOSYLMETHIONINAMINE[c]
• With common name(s):
  • 1 S-adenosyl-L-methionine[c] + 1 H+[c] => 1 CO2[c] + 1 S-adenosyl 3-(methylthio)propylamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g13727.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g9259.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g13727.t3
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g13727.t2
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• BSUBPOLYAMSYN-PWY, spermidine biosynthesis I: BSUBPOLYAMSYN-PWY
  • 2 reactions found over 2 reactions in the full pathway
• ARGSPECAT-PWY, spermine biosynthesis: ARGSPECAT-PWY
  • 2 reactions found over 2 reactions in the full pathway
• PWY-6834, spermidine biosynthesis III: PWY-6834
  • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • P82184
  • P21182
  • P0A7F6
  • P17707
  • P28918
  • P17708
  • P50243
  • P46255
  • Q04694
  • Q42679
  • Q42829
  • P79888
  • O04009
  • O24575
  • Q43820
  • Q39676
  • Q39677
  • O49972
  • O65354
  • O02655
• RHEA:
  • 15982
• LIGAND-RXN:
  • R00178