Difference between revisions of "HEMN-RXN"

Latest revision as of 11:48, 27 June 2019

Reaction HEMN-RXN

• ec number:
  • EC-1.3.98.3
• direction:
  • LEFT-TO-RIGHT
• Synonym(s):

Reaction Formula

• With identifiers:
  • 2 S-ADENOSYLMETHIONINE[c] + 1 COPROPORPHYRINOGEN_III[c] => 1 PROTOPORPHYRINOGEN[c] + 2 CARBON-DIOXIDE[c] + 2 MET[c] + 2 CH33ADO[c]
• With common name(s):
  • 2 S-adenosyl-L-methionine[c] + 1 coproporphyrinogen III[c] => 1 protoporphyrinogen IX[c] + 2 CO2[c] + 2 L-methionine[c] + 2 5'-deoxyadenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g18560.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g4466.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g3382.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g12517.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g8307.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• HEMESYN2-PWY, heme b biosynthesis II (anaerobic): HEMESYN2-PWY
  • 3 reactions found over 4 reactions in the full pathway
• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• RHEA:
  • 15426
• LIGAND-RXN:
  • R06895