Difference between revisions of "PROTOPORGENOXI-RXN"

Latest revision as of 10:48, 27 June 2019

Reaction PROTOPORGENOXI-RXN

• ec number:
  • EC-1.3.3.4
• direction:
  • LEFT-TO-RIGHT
• common name:
  • protoporphyrinogen oxidase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 PROTOPORPHYRINOGEN[c] + 3 OXYGEN-MOLECULE[c] => 1 PROTOPORPHYRIN_IX[c] + 3 HYDROGEN-PEROXIDE[c]
• With common name(s):
  • 1 protoporphyrinogen IX[c] + 3 oxygen[c] => 1 protoporphyrin IX[c] + 3 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g18713.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
  • 5 reactions found over 9 reactions in the full pathway
• HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic): HEME-BIOSYNTHESIS-II
  • 4 reactions found over 4 reactions in the full pathway
• CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
  • 6 reactions found over 9 reactions in the full pathway
• PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III: PWY0-1415
  • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• UNIPROT:
  • P50336
  • Q49404
  • Q9CHX0
  • P0ACB4
  • Q7M1R6
  • P51175
  • O24163
  • O24164
  • O64384
  • O64385
• RHEA:
  • 25577
• LIGAND-RXN:
  • R03222