UROGENDECARBOX-RXN

Reaction UROGENDECARBOX-RXN

• ec number:
  • EC-4.1.1.37
• direction:
  • LEFT-TO-RIGHT
• common name:
  • uroporphyrinogen decarboxylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 UROPORPHYRINOGEN-III[c] + 4 PROTON[c] => 1 COPROPORPHYRINOGEN_III[c] + 4 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 uroporphyrinogen-III[c] + 4 H+[c] => 1 coproporphyrinogen III[c] + 4 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g13187.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g13190.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-saccharina_japonica
• Gene: g11592.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• HEMESYN2-PWY, heme b biosynthesis II (anaerobic): HEMESYN2-PWY
  • 3 reactions found over 4 reactions in the full pathway
• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 4 reactions found over 9 reactions in the full pathway
• HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic): HEME-BIOSYNTHESIS-II
  • 4 reactions found over 4 reactions in the full pathway
• PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III: PWY0-1415
  • 5 reactions found over 6 reactions in the full pathway
• CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
  • 6 reactions found over 9 reactions in the full pathway
• PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
  • 5 reactions found over 9 reactions in the full pathway
• PWY-7766, heme b biosynthesis IV (Gram-positive bacteria): PWY-7766
  • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • P06132
  • P16891
  • P32395
  • Q9PN54
  • Q9JV52
  • P29680
  • P32347
  • P32920
  • P54224
  • O81220
  • P70697
• RHEA:
  • 19866
• LIGAND-RXN:
  • R03197