RXN0-2161
From metabolic_network
Revision as of 10:25, 27 June 2019 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2161 RXN0-2161] == * ec number: ** [http://enzyme.expasy.org/EC/6.1.1.11 EC-6.1.1.11] * direct...")
Contents
Reaction RXN0-2161
- ec number:
- direction:
- LEFT-TO-RIGHT
- common name:
- L-serine:tRNASec ligase (AMP-forming)
- serine-tRNA ligase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 a tRNAsec[c] + 1 L-serine[c] + 1 ATP[c] => 1 AMP[c] + 1 an L-seryl-[tRNAsec][c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g15275.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: annotation-cladosiphon_okamuranus
- Gene: g15275.t1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-saccharina_japonica
- Gene: g9305.t1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-saccharina_japonica
- Gene: g9305.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: annotation-cladosiphon_okamuranus
Pathways
- PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
- 4 reactions found over 4 reactions in the full pathway
- PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-saccharina_japonica
External links
