RXNN-404

Reaction RXNN-404

• ec number:
  • EC-3.5.1.4
• direction:
  • LEFT-TO-RIGHT
• common name:
  • amidase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-237[c] + 1 WATER[c] => 1 INDOLE_ACETATE_AUXIN[c] + 1 AMMONIUM[c]
• With common name(s):
  • 1 (indol-3-yl)acetamide[c] + 1 H2O[c] => 1 (indol-3-yl)acetate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g4180.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g9205.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4439.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Pathways

• PWY-3161, indole-3-acetate biosynthesis III (bacteria): PWY-3161
  • 1 reactions found over 2 reactions in the full pathway
• PWY-581, indole-3-acetate biosynthesis II: PWY-581
  • 5 reactions found over 13 reactions in the full pathway
• PWY-5025, indole-3-acetate biosynthesis IV (bacteria): PWY-5025
  • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 34372
• LIGAND-RXN:
  • R03096