FPPSYN-RXN
From metabolic_network
Revision as of 10:31, 27 June 2019 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] == * ec number: ** [http://enzyme.expasy.org/EC/2.5.1.10 EC-2.5.1.10] * dire...")
Contents
Reaction FPPSYN-RXN
- ec number:
- direction:
- LEFT-TO-RIGHT
- common name:
- geranyltranstransferase
- farnesyl diphosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GERANYL-PP[c] + 1 DELTA3-ISOPENTENYL-PP[c] => 1 FARNESYL-PP[c] + 1 PPI[c]
- With common name(s):
- 1 geranyl diphosphate[c] + 1 isopentenyl diphosphate[c] => 1 (2E,6E)-farnesyl diphosphate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g9359.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g8181.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-nannochloropsis_salina
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g11610.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g7763.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
Pathways
- PWY-7721, methyl phomopsenoate biosynthesis: PWY-7721
- 2 reactions found over 4 reactions in the full pathway
- PWY-7736, stellatic acid biosynthesis: PWY-7736
- 3 reactions found over 8 reactions in the full pathway
- PWY-6859, all-trans-farnesol biosynthesis: PWY-6859
- 3 reactions found over 4 reactions in the full pathway
- PWY-7102, bisabolene biosynthesis (engineered): PWY-7102
- 3 reactions found over 6 reactions in the full pathway
- PWY-5123, trans, trans-farnesyl diphosphate biosynthesis: PWY-5123
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-saccharina_japonica
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
External links
- UNIPROT:
- RHEA:
- LIGAND-RXN:
