GDPMANDEHYDRA-RXN

Reaction GDPMANDEHYDRA-RXN

• ec number:
  • EC-4.2.1.47
• direction:
  • LEFT-TO-RIGHT
• common name:
  • GDP-mannose 4,6-dehydratase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 GDP-MANNOSE[c] => 1 GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE[c] + 1 WATER[c]
• With common name(s):
  • 1 GDP-α-D-mannose[c] => 1 GDP-4-dehydro-α-D-rhamnose[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g10327.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g13365.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-arabidopsis_thaliana

Pathways

• PWY-5738, GDP-6-deoxy-D-talose biosynthesis: PWY-5738
  • 1 reactions found over 2 reactions in the full pathway
• PWY-66, GDP-L-fucose biosynthesis I (from GDP-D-mannose): PWY-66
  • 2 reactions found over 2 reactions in the full pathway
• PWY-5739, GDP-D-perosamine biosynthesis: PWY-5739
  • 1 reactions found over 2 reactions in the full pathway
• PWY-5740, GDP-L-colitose biosynthesis: PWY-5740
  • 1 reactions found over 5 reactions in the full pathway
• GDPRHAMSYN-PWY, GDP-D-rhamnose biosynthesis: GDPRHAMSYN-PWY
  • 1 reactions found over 2 reactions in the full pathway
• PWY-7573, GDP-mycosamine biosynthesis: PWY-7573
  • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph

External links

• UNIPROT:
  • Q84439
• RHEA:
  • 23821
• LIGAND-RXN:
  • R00888