RXNARA-8002
From metabolic_network
Revision as of 10:36, 27 June 2019 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNARA-8002 RXNARA-8002] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl-diphosph...")
Contents
Reaction RXNARA-8002
- direction:
- LEFT-TO-RIGHT
- common name:
- geranylgeranyl-diphosphate geranylgeranyltransferase
- Synonym(s):
- prephytoene-diphosphate synthase
- PSase
- geranylgeranyl-diphosphate geranylgeranyltransferase
Reaction Formula
- With identifiers:
- With common name(s):
- 1 prephytoene diphosphate[c] => 1 15-cis-phytoene[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g11610.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
Pathways
- PWY-6287, neurosporene biosynthesis: PWY-6287
- 5 reactions found over 5 reactions in the full pathway
- PWY-5942, trans-lycopene biosynthesis I: PWY-5942
- 3 reactions found over 4 reactions in the full pathway
- PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-saccharina_japonica
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
External links
