RXN-12461
From metabolic_network
Revision as of 10:38, 27 June 2019 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12461 RXN-12461] == * ec number: ** [http://enzyme.expasy.org/EC/2.1.1.229 EC-2.1.1.229] * dire...")
Contents
Reaction RXN-12461
- ec number:
- direction:
- LEFT-TO-RIGHT
- common name:
- tRNA (carboxymethyluridine34-5-O)-methyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 carbo-me-ur-34-tRNA[c] => 1 5-2-me-oxy-2-oxo-et-ur-34-tRNA[c] + 1 ADENOSYL-HOMO-CYS[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 a carboxymethyluridine34 in tRNA[c] => 1 a 5-(2-methoxy-2-oxoethyl)uridine34 in tRNA[c] + 1 S-adenosyl-L-homocysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g18386.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g18386.t2
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g4374.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
Pathways
- PWY-7888, tRNA-uridine 2-thiolation (cytoplasmic): PWY-7888
- 2 reactions found over 7 reactions in the full pathway
- PWY-6829, tRNA methylation (yeast): PWY-6829
- 14 reactions found over 15 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-saccharina_japonica
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
External links
- RHEA: