RXN-8661
From metabolic_network
Revision as of 11:47, 27 June 2019 by Dyliss (Talk | contribs) (Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8661 RXN-8661] == * ec number: ** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11] * direction:...")
Contents
Reaction RXN-8661
- ec number:
- direction:
- LEFT-TO-RIGHT
- common name:
- [histone-H3]-lysine-36 demethylase
- histone demethylase activity (H3-K36 specific)
- Synonym(s):
- JHDM1A
- JmjC domain-containing histone demethylase 1A
- H3-K36-specific demethylase
- histone-lysine (H3-K36) demethylase
- histone demethylase
- protein-6-N,6-N-dimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase
Reaction Formula
- With identifiers:
- 1 CPD-8901[c] + 1 2-KETOGLUTARATE[c] + 1 OXYGEN-MOLECULE[c] + 1 PROTON[c] => 1 Protein-L-lysine[c] + 1 SUC[c] + 1 FORMALDEHYDE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 a [protein] N6-methyl-L-lysine[c] + 1 2-oxoglutarate[c] + 1 oxygen[c] + 1 H+[c] => 1 a [protein]-L-lysine[c] + 1 succinate[c] + 1 formaldehyde[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: g7683.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g8810.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: annotation-cladosiphon_okamuranus
- Gene: g18712.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: GO-TERM
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g12822.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g8811.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g8614.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
- Gene: g16687.t1
- Source: annotation-cladosiphon_okamuranus
- Assignment: EC-NUMBER
- Source: orthology-saccharina_japonica
- Source: annotation-cladosiphon_okamuranus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-saccharina_japonica
- Tool: pantograph
- Source: orthology-saccharina_japonica
- Category: annotation
- Source: annotation-cladosiphon_okamuranus
- Tool: pathwaytools
- Source: annotation-cladosiphon_okamuranus
External links
- RHEA:
"histone-H3]-lysine-36 demethylase" cannot be used as a page name in this wiki.
