DNA-LIGASE-ATP-RXN

Reaction DNA-LIGASE-ATP-RXN

• ec number:
  • EC-6.5.1.7
  • EC-6.5.1.1
  • EC-6.5.1.6
• direction:
  • LEFT-TO-RIGHT
• common name:
  • DNA ligase (ATP)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 3-Hydroxy-Terminated-DNAs[c] + 1 5-Phospho-terminated-DNAs[c] + 1 ATP[c] => 1 DNA-N[c] + 1 AMP[c] + 1 PPI[c]
• With common name(s):
  • 1 a [DNA]-3'-hydroxyl[c] + 1 a 5'-phospho-[DNA][c] + 1 ATP[c] => 1 DNAn[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g19123.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g16715.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6927.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g16056.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g19122.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
• Gene: g6926.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16715.t1
  • Source: orthology-saccharina_japonica

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P12000
  • P18858
  • P35970
  • Q9QNG8
  • Q9PM08
  • Q57635
  • P49917
  • P49916
  • P37913
  • P51892
  • P16272
  • P33798
  • P00970
  • P00969
  • P04819
  • P19088
  • P07717
  • P26813
  • Q02093
  • Q23694
  • Q67480
  • Q42572
  • P20492
• LIGAND-RXN:
  • R00381