R223-RXN

Reaction R223-RXN

• ec number:
  • EC-6.2.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • octanoyl-CoA ligase
  • acyl-CoA synthetase
  • long-chain fatty acid-CoA ligase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-195[c] + 1 ATP[c] + 1 CO-A[c] => 1 CPD-196[c] + 1 AMP[c] + 1 PPI[c]
• With common name(s):
  • 1 octanoate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 octanoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g17549.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g10473.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7072.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g7800.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16711.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
• Gene: g16711.t1
  • Source: orthology-ectocarpus_siliculosus

Pathways

• PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
  • 4 reactions found over 6 reactions in the full pathway
• P221-PWY, octane oxidation: P221-PWY
  • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph