RNA-LIGASE-ATP-RXN

Reaction RNA-LIGASE-ATP-RXN

• ec number:
  • EC-6.5.1.3
• direction:
  • LEFT-TO-RIGHT
• common name:
  • RNA ligase (ATP)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 3Prime-OH-Terminated-RNAs[c] + 1 5-Phospho-RNA[c] + 1 ATP[c] => 1 AMP[c] + 1 PPI[c] + 1 RNA-Holder[c]
• With common name(s):
  • 1 an [RNA]-3'-hydroxyl[c] + 1 a 5'-phospho-ribonucleoside-[RNA][c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 a ribonucleic acid[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g14401.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: GO-TERM
  • Source: orthology-saccharina_japonica
• Gene: g5517.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph

External links

• UNIPROT:
  • P00971
• LIGAND-RXN:
  • R07640