RXN0-6479

Reaction RXN0-6479

• ec number:
  • EC-3.1.13.1
• direction:
  • LEFT-TO-RIGHT
• common name:
  • polynucleotide phosporylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD0-2351[c] + n WATER[c] => 1 CPD0-2352[c] + n Nucleoside-Monophosphates[c]
• With common name(s):
  • 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] + n H2O[c] => 1 a tRNA precursor with a 5' extension and a short 3' extension[c] + n a nucleoside 5'-monophosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g4612.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g7628.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER

Pathways

• PWY0-1479, tRNA processing: PWY0-1479
  • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph