Difference between revisions of "FHL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/BACCL BACCL] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin acetyl CoA carboxylase ligas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FHL FHL] == * direction: ** LEFT-TO-RIGHT * common name: ** Formate-hydrogen lyase * Synonym(s): =...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/BACCL BACCL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FHL FHL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Biotin acetyl CoA carboxylase ligase
+
** Formate-hydrogen lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[btn]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[btamp]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[for]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[h2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Biotin[c] '''+''' 1.0 H+[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Biotinyl 5  AMP C20H27N7O9PS[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 H+[c] '''+''' 1.0 Formate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Hydrogen[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0118485]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS0118505]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS22060]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS0110715]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS0110705]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS22065]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
 
−
** '''28''' reactions found over '''67''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31115 31115]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27610 27610]
−
* BioCyc : META:RXN0-7192
+
* MetaNetX (MNX) Equation : MNXR99594
−
* MetaNetX (MNX) Equation : MNXR96208
+
* BioCyc : META:FHLMULTI-RXN
−
* KEGG Reaction : R01074
+
−
* EC Number : 6.2.1.11
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Biotin acetyl CoA carboxylase ligase}}
+
{{#set: common name=Formate-hydrogen lyase}}
−
{{#set: in pathway=map01100|map00780}}
+
{{#set: gene associated=B471_RS0118485|B471_RS0118505|B471_RS22060|B471_RS0110715|B471_RS0110705|B471_RS22065}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:44, 21 March 2018

Reaction FHL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Formate-hydrogen lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 h[c] + 1.0 for[c] => 1.0 co2[c] + 1.0 h2[c]
  • With common name(s):
    • 1.0 H+[c] + 1.0 Formate[c] => 1.0 CO2 CO2[c] + 1.0 Hydrogen[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR99594
  • BioCyc : META:FHLMULTI-RXN




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