Difference between revisions of "RXN-9516"

Latest revision as of 20:28, 25 March 2018

Reaction RXN-9516

• direction:
  • LEFT-TO-RIGHT
• common name:
  • 3-oxo-hexanoyl-[acyl-carrier protein] synthase
  • Thiolase-like, subgroup
  • Beta-ketoacyl synthase, N-terminal
  • beta-ketoacyl synthase, partial
  • 3-oxoacyl-[acyl-carrier-protein] synthase
• ec number:
  • EC-2.3.1.41
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Butanoyl-ACPs[c] + 1 PROTON[c] + 1 MALONYL-ACP[c] => 1 3-oxo-hexanoyl-ACPs[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
• With common name(s):
  • 1 a butyryl-[acp][c] + 1 H+[c] + 1 a malonyl-[acp][c] => 1 a 3-oxo-hexanoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Ec-12_000650
  • Source: annotation-esiliculosus_genome
    • Assignment: GO-TERM
  • Source: orthology-aragem
  • Source: orthology-aragem
• Gene: Ec-12_000640
  • Source: annotation-esiliculosus_genome
    • Assignment: EC-NUMBER
• Gene: Ec-27_003480
  • Source: annotation-esiliculosus_genome
    • Assignment: EC-NUMBER
• Gene: Ec-27_002090
  • Source: annotation-esiliculosus_genome
    • Assignment: EC-NUMBER
  • Source: orthology-aragem
  • Source: orthology-aragem

Pathways

• PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
  • 31 reactions found over 31 reactions in the full pathway
• PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
  • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-aragem
    • Tool: pantograph
• Category: manual
  • Source: manual-erythro
  • Source: manual-sphingo361
  • Source: manual-sphingo391
  • Source: manual-roseov420
  • Source: manual-rhizobi
  • Source: manual-hoflea
  • Source: manual-imperaili
  • Source: manual-roseov134
  • Source: manual-marino
  • Source: manual-bosea
• Category: annotation
  • Source: annotation-esiliculosus_genome
    • Tool: pathwaytools

External links