HEMN-RXN

Reaction HEMN-RXN

• direction:
  • LEFT-TO-RIGHT
• common name:
  • Radical SAM
• ec number:
  • EC-1.3.98.c
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 COPROPORPHYRINOGEN_III[c] + 2 S-ADENOSYLMETHIONINE[c] => 1 PROTOPORPHYRINOGEN[c] + 2 MET[c] + 2 CARBON-DIOXIDE[c] + 2 CH33ADO[c]
• With common name(s):
  • 1 coproporphyrinogen III[c] + 2 S-adenosyl-L-methionine[c] => 1 protoporphyrinogen IX[c] + 2 L-methionine[c] + 2 CO2[c] + 2 5'-deoxyadenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: Ec-19_002210
  • Source: annotation-esiliculosus_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Ec-26_001240
  • Source: annotation-esiliculosus_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Ec-20_000950
  • Source: annotation-esiliculosus_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Ec-14_004300
  • Source: annotation-esiliculosus_genome
    • Assignment: AUTOMATED-NAME-MATCH
• Gene: Ec-26_002590
  • Source: annotation-esiliculosus_genome
    • Assignment: AUTOMATED-NAME-MATCH
  • Source: orthology-aragem

Pathways

• PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
  • 6 reactions found over 9 reactions in the full pathway
• HEMESYN2-PWY, heme biosynthesis II (anaerobic): HEMESYN2-PWY
  • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-aragem
    • Tool: pantograph
• Category: manual
  • Source: manual-erythro
  • Source: manual-sphingo361
  • Source: manual-sphingo391
  • Source: manual-roseov420
  • Source: manual-rhizobi
  • Source: manual-hoflea
  • Source: manual-imperaili
  • Source: manual-roseov134
  • Source: manual-marino
  • Source: manual-bosea
• Category: annotation
  • Source: annotation-esiliculosus_genome
    • Tool: pathwaytools

External links

• RHEA:
  • 15425
• LIGAND-RXN:
  • R06895