Difference between revisions of "METHIONINE-DEG1-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] == * direction: ** LEFT-TO-RIGHT * common name: ** lycopene beta cyclase * ec...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** lycopene beta cyclase
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** L-methionine degradation I (to L-homocysteine)
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* ec number:
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** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
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* [[ADENOSYLHOMOCYSTEINASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 all-trans-lycopene[c] '''=>''' 1 γ-carotene[c]
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*** [[Ec-22_002610]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[S-ADENMETSYN-RXN]]
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* [[Ec-07_007260]]
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** 1 associated gene(s):
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** [[pantograph]]-[[aragem]]
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*** [[Ec-06_008470]]
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* [[Ec-00_005850]]
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** 2 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-24_002150]]
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*** [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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== Reaction(s) not found ==
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* [[Ec-02_005510]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_002140]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_005820]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-10_006240]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
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{{#set: common name=L-methionine degradation I (to L-homocysteine)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: common name=lycopene beta cyclase}}
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{{#set: total reaction=3}}
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{{#set: ec number=EC-5.5.1.19}}
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{{#set: completion rate=67.0}}
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{{#set: gene associated=Ec-07_007260|Ec-00_005850|Ec-24_002150|Ec-02_005510|Ec-24_002140|Ec-00_005820|Ec-10_006240}}
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{{#set: in pathway=PWY-5943|PWY-7591}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:18, 21 March 2018

Pathway METHIONINE-DEG1-PWY

  • taxonomic range:
  • common name:
    • L-methionine degradation I (to L-homocysteine)
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=METHIONINE-DEG1-PWY&oldid=25932"