Difference between revisions of "Ec-23 004040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Ec-23_004040 == * left end position: ** 4490466 * transcription direction: ** NEGATIVE * right end position: ** 4495781 * centisome position: ** 92.7...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THI-P-SYN-RXN THI-P-SYN-RXN] ==
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== Gene Ec-23_004040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4490466
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
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** NEGATIVE
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* right end position:
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** 4495781
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* centisome position:
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** 92.78844   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0221_0008
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** Esi0221_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4.2.2.10-RXN]]
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** 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[THZ-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[THIAMINE-P]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c] '''+''' 1 H+[c] '''=>''' 1 thiamine phosphate[c] '''+''' 1 diphosphate[c]
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* Reaction: [[RXN-14897]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-06_006870]]
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* [[PWY-7243]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6908]], thiamine diphosphate biosynthesis IV (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4490466}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22328 22328]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4495781}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03223 R03223]
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{{#set: centisome position=92.78844    }}
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* UNIPROT:
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{{#set: common name=Esi_0221_0008|Esi0221_0008}}
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** [http://www.uniprot.org/uniprot/P41835 P41835]
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{{#set: reaction associated=4.2.2.10-RXN|RXN-14897}}
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** [http://www.uniprot.org/uniprot/P71350 P71350]
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{{#set: pathway associated=PWY-7243}}
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** [http://www.uniprot.org/uniprot/O25514 O25514]
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** [http://www.uniprot.org/uniprot/Q9PNL3 Q9PNL3]
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** [http://www.uniprot.org/uniprot/Q9JWI2 Q9JWI2]
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** [http://www.uniprot.org/uniprot/Q9ZL01 Q9ZL01]
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** [http://www.uniprot.org/uniprot/P30137 P30137]
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** [http://www.uniprot.org/uniprot/P39594 P39594]
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** [http://www.uniprot.org/uniprot/P40386 P40386]
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** [http://www.uniprot.org/uniprot/P72965 P72965]
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** [http://www.uniprot.org/uniprot/O48881 O48881]
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** [http://www.uniprot.org/uniprot/O34294 O34294]
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** [http://www.uniprot.org/uniprot/Q9ZBL5 Q9ZBL5]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.5.1.3}}
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{{#set: gene associated=Ec-06_006870}}
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{{#set: in pathway=PWY-6897|PWY-7356|PWY-6908|PWY-7357}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:21, 21 March 2018

Gene Ec-23_004040

  • left end position:
    • 4490466
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4495781
  • centisome position:
    • 92.78844
  • Synonym(s):
    • Esi_0221_0008
    • Esi0221_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-23_004040&oldid=26298"