Difference between revisions of "5.99.1.2-RXN"

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(Created page with "Category:Gene == Gene Ec-03_001910 == * left end position: ** 2298519 * transcription direction: ** POSITIVE * right end position: ** 2312548 * centisome position: ** 35.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** DNA topoisomerase ** DNA...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-03_001910 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
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* left end position:
+
* direction:
−
** 2298519
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** REVERSIBLE
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* transcription direction:
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* common name:
−
** POSITIVE
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** DNA topoisomerase
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* right end position:
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** DNA topoisomerase type I
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** 2312548
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** Spo11/DNA topoisomerase VI subunit A
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* centisome position:
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* ec number:
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** 35.206593   
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** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0011_0179
 
−
** Esi0011_0179
 
  
−
== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15122]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
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***go-term
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* With common name(s):
−
* [[THREDEHYD-RXN]]
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** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY66-428]]
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* Gene: [[Ec-24_003570]]
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* [[ILEUSYN-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5826]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5437]]
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* Gene: [[Ec-01_011320]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-12_007130]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-15_001600]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-01_011310]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-08_003340]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_004560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_007190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_001530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2298519}}
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* UNIPROT:
−
{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
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{{#set: right end position=2312548}}
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** [http://www.uniprot.org/uniprot/Q07050 Q07050]
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{{#set: centisome position=35.206593    }}
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** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
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{{#set: common name=Esi_0011_0179|Esi0011_0179}}
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** [http://www.uniprot.org/uniprot/Q59046 Q59046]
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{{#set: reaction associated=RXN-15122|THREDEHYD-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
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{{#set: pathway associated=PWY66-428|ILEUSYN-PWY|PWY-5826|PWY-5437}}
+
** [http://www.uniprot.org/uniprot/P47368 P47368]
 +
** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
 +
** [http://www.uniprot.org/uniprot/P43704 P43704]
 +
** [http://www.uniprot.org/uniprot/P43012 P43012]
 +
** [http://www.uniprot.org/uniprot/P0A620 P0A620]
 +
** [http://www.uniprot.org/uniprot/P04786 P04786]
 +
** [http://www.uniprot.org/uniprot/P13099 P13099]
 +
** [http://www.uniprot.org/uniprot/P06612 P06612]
 +
** [http://www.uniprot.org/uniprot/P11387 P11387]
 +
** [http://www.uniprot.org/uniprot/P07799 P07799]
 +
** [http://www.uniprot.org/uniprot/P93119 P93119]
 +
** [http://www.uniprot.org/uniprot/O13463 O13463]
 +
** [http://www.uniprot.org/uniprot/Q94705 Q94705]
 +
** [http://www.uniprot.org/uniprot/Q04750 Q04750]
 +
** [http://www.uniprot.org/uniprot/P14294 P14294]
 +
** [http://www.uniprot.org/uniprot/P30181 P30181]
 +
** [http://www.uniprot.org/uniprot/P34185 P34185]
 +
** [http://www.uniprot.org/uniprot/P30189 P30189]
 +
** [http://www.uniprot.org/uniprot/P40114 P40114]
 +
** [http://www.uniprot.org/uniprot/P41511 P41511]
 +
** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
 +
** [http://www.uniprot.org/uniprot/Q26024 Q26024]
 +
** [http://www.uniprot.org/uniprot/Q27529 Q27529]
 +
** [http://www.uniprot.org/uniprot/P41512 P41512]
 +
** [http://www.uniprot.org/uniprot/O24307 O24307]
 +
** [http://www.uniprot.org/uniprot/P71196 P71196]
 +
** [http://www.uniprot.org/uniprot/O70157 O70157]
 +
** [http://www.uniprot.org/uniprot/O60126 O60126]
 +
** [http://www.uniprot.org/uniprot/O61660 O61660]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=DNA topoisomerase}}
 +
{{#set: common name=DNA topoisomerase type I}}
 +
{{#set: common name=Spo11/DNA topoisomerase VI subunit A}}
 +
{{#set: ec number=EC-5.99.1.2}}
 +
{{#set: gene associated=Ec-24_003570|Ec-01_011320|Ec-12_007130|Ec-15_001600|Ec-01_011310|Ec-08_003340|Ec-03_004560|Ec-12_007190|Ec-03_001530}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction 5.99.1.2-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • DNA topoisomerase
    • DNA topoisomerase type I
    • Spo11/DNA topoisomerase VI subunit A
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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