Difference between revisions of "GLUTAMATE-SYNTHASE-FERREDOXIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXYINDOLE_ACETALDEHYDE 5-HYDROXYINDOLE_ACETALDEHYDE] == * smiles: ** C1(NC2(C(C(CC=O)=1)=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIG...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXYINDOLE_ACETALDEHYDE 5-HYDROXYINDOLE_ACETALDEHYDE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] ==
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* smiles:
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* direction:
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** C1(NC2(C(C(CC=O)=1)=CC(=CC=2)O))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=OBFAPCIUSYHFIE-UHFFFAOYSA-N
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* common name:
 
* common name:
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** 5-hydroxyindole acetaldehyde
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** Glutamate synthase (ferredoxin-dependent)
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* molecular weight:
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** Aldolase-type TIM barrel
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** 175.187   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-10780]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 2 H+[c] '''+''' 1 L-glutamine[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_000720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-26_004630]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_004970]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=74688 74688]
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** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
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* HMDB : HMDB04073
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P23225 P23225]
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** [http://www.genome.jp/dbget-bin/www_bget?C05634 C05634]
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** [http://www.uniprot.org/uniprot/O67512 O67512]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P96218 P96218]
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** [http://www.chemspider.com/Chemical-Structure.67261.html 67261]
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** [http://www.uniprot.org/uniprot/Q06434 Q06434]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q43081 Q43081]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=50157 50157]
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** [http://www.uniprot.org/uniprot/P55037 P55037]
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* METABOLIGHTS : MTBLC50157
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** [http://www.uniprot.org/uniprot/Q43155 Q43155]
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{{#set: smiles=C1(NC2(C(C(CC=O)=1)=CC(=CC=2)O))}}
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** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
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{{#set: inchi key=InChIKey=OBFAPCIUSYHFIE-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/P51375 P51375]
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{{#set: common name=5-hydroxyindole acetaldehyde}}
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** [http://www.uniprot.org/uniprot/P55038 P55038]
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{{#set: molecular weight=175.187    }}
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** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
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{{#set: consumed by=RXN-10780}}
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** [http://www.uniprot.org/uniprot/Q08258 Q08258]
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** [http://www.uniprot.org/uniprot/O49154 O49154]
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** [http://www.uniprot.org/uniprot/O19906 O19906]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glutamate synthase (ferredoxin-dependent)}}
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{{#set: common name=Aldolase-type TIM barrel}}
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{{#set: ec number=EC-1.4.7.1}}
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{{#set: gene associated=Ec-00_000720|Ec-26_004630|Ec-27_004970}}
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{{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamate synthase (ferredoxin-dependent)
    • Aldolase-type TIM barrel
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6964, ammonia assimilation cycle II: PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4341, L-glutamate biosynthesis V: PWY-4341
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III: PWY-6549
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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