Difference between revisions of "CPD0-2105"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-674 CPD-674] == * smiles: ** C(=O)([O-])C=CC1(=CC=CC=C1) * inchi key: ** InChIKey=WBYWAXJHA...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-674 CPD-674] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])C=CC1(=CC=CC=C1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WBYWAXJHAXSJNI-VOTSOKGWSA-M
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* common name:
 
* common name:
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** trans-cinnamate
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** pyruvate carboxylase
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* molecular weight:
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* ec number:
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** 147.153   
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** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** β-phenylacrylic acid
 
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** 3-phenyl-2-propenoic acid
 
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** cinnamic acid
 
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** cinnamate
 
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** trans-cinnamic acid
 
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** (E)-cinnamate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-2001]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PYRUVATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 pyruvate[c] '''+''' 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 oxaloacetate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_001890]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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** '''9''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 140-10-3
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* RHEA:
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* BIGG : 34938
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5957728 5957728]
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** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
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* HMDB : HMDB00930
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q05920 Q05920]
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** [http://www.genome.jp/dbget-bin/www_bget?C00423 C00423]
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** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P95127 P95127]
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** [http://www.chemspider.com/Chemical-Structure.4762929.html 4762929]
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** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15669 15669]
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** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
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* METABOLIGHTS : MTBLC15669
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** [http://www.uniprot.org/uniprot/P11498 P11498]
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{{#set: smiles=C(=O)([O-])C=CC1(=CC=CC=C1)}}
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** [http://www.uniprot.org/uniprot/P52873 P52873]
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{{#set: inchi key=InChIKey=WBYWAXJHAXSJNI-VOTSOKGWSA-M}}
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** [http://www.uniprot.org/uniprot/P11154 P11154]
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{{#set: common name=trans-cinnamate}}
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** [http://www.uniprot.org/uniprot/P32327 P32327]
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{{#set: molecular weight=147.153    }}
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** [http://www.uniprot.org/uniprot/O17732 O17732]
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{{#set: common name=β-phenylacrylic acid|3-phenyl-2-propenoic acid|cinnamic acid|cinnamate|trans-cinnamic acid|(E)-cinnamate}}
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** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
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{{#set: consumed by=RXN-2001}}
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** [http://www.uniprot.org/uniprot/Q16921 Q16921]
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** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate carboxylase}}
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{{#set: ec number=EC-6.4.1.1}}
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{{#set: gene associated=Ec-03_001890}}
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{{#set: in pathway=PWY-6142|PWY-6146|PWY-5750|P42-PWY|PWY66-399}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:34, 17 March 2018

Reaction PYRUVATE-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyruvate carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pyruvate[c] + 1 ATP[c] + 1 hydrogen carbonate[c] => 1 phosphate[c] + 1 ADP[c] + 1 oxaloacetate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • PWY-6146, Methanobacterium thermoautotrophicum biosynthetic metabolism: PWY-6146
    • 9 reactions found over 16 reactions in the full pathway
  • PWY-5750, itaconate biosynthesis: PWY-5750
    • 3 reactions found over 4 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle: P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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