Difference between revisions of "Ec-26 001280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
(Created page with "Category:Gene == Gene Ec-26_001280 == * left end position: ** 1618355 * transcription direction: ** NEGATIVE * right end position: ** 1627858 * centisome position: ** 24.5...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLMETHIONINE-DEFORMYLASE-RXN FORMYLMETHIONINE-DEFORMYLASE-RXN] ==
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== Gene Ec-26_001280 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1618355
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* common name:
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* transcription direction:
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** Formylmethionine deformylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.31 EC-3.5.1.31]
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** 1627858
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* centisome position:
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** 24.582554   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0161_0029
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** Esi0161_0029
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-FORMYLMETHIONINE]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[FORMATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H2O[c] '''+''' 1 N-formyl-L-methionine[c] '''=>''' 1 L-methionine[c] '''+''' 1 formate[c]
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* Reaction: [[RXN-15043]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16025]]
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* [[Ec-24_001980]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-16032]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* Category: [[annotation]]
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* Reaction: [[RXN-16066]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-16067]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-16076]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-16077]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-16118]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-1623]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17008]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17009]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17010]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17011]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17012]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17013]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17014]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17015]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17019]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17021]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17022]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17023]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17024]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17729]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5514]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-6705]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRIGLSYN-PWY]]
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* [[PWY-7411]]
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* [[PWY-7589]]
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* [[PWY-7782]]
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* [[PWY-5667]]
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* [[PWY-5981]]
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* [[PWY-7417]]
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* [[PWY0-1319]]
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* [[PWY-7587]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1618355}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17781 17781]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1627858}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00653 R00653]
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{{#set: centisome position=24.582554    }}
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* UNIPROT:
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{{#set: common name=Esi_0161_0029|Esi0161_0029}}
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** [http://www.uniprot.org/uniprot/P63916 P63916]
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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** [http://www.uniprot.org/uniprot/Q9PIT8 Q9PIT8]
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-7411|PWY-7589|PWY-7782|PWY-5667|PWY-5981|PWY-7417|PWY0-1319|PWY-7587|PWY-6453}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Formylmethionine deformylase}}
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{{#set: ec number=EC-3.5.1.31}}
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{{#set: gene associated=Ec-24_001980}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:21, 21 March 2018

Gene Ec-26_001280

  • left end position:
    • 1618355
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1627858
  • centisome position:
    • 24.582554
  • Synonym(s):
    • Esi_0161_0029
    • Esi0161_0029

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_001280&oldid=26314"