Difference between revisions of "3.2.1.21-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** malate dehydrog...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, fam...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.21-RXN 3.2.1.21-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** malate dehydrogenase (decarboxylating) (NAD+)
+
** Beta-glucosidase, family GH1
 +
** Beta-glucosidase, family GH3
 +
** Beta-glucosidase, family GH30
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
+
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
−
** [http://enzyme.expasy.org/EC/4.1.1.3 EC-4.1.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Beta-D-glucosides]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[Non-Glucosylated-Glucose-Acceptors]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxaloacetate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 pyruvate[c]
+
** 1 H2O[c] '''+''' 1 a β-D glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 a non glucosylated D-glucose acceptor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_003680]]
+
* Gene: [[Ec-26_002410]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-07_002070]]
+
* Gene: [[Ec-04_002190]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-07_002060]]
+
* Gene: [[Ec-20_004800]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_005240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_001850]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6339]], syringate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6339 PWY-6339]
 
−
** '''1''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 39: Line 40:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15641 15641]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13187 P13187]
+
** [http://www.uniprot.org/uniprot/P29091 P29091]
−
** [http://www.uniprot.org/uniprot/P13155 P13155]
+
** [http://www.uniprot.org/uniprot/P29090 P29090]
−
** [http://www.uniprot.org/uniprot/P13156 P13156]
+
** [http://www.uniprot.org/uniprot/P27034 P27034]
−
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
+
** [http://www.uniprot.org/uniprot/P16084 P16084]
 +
** [http://www.uniprot.org/uniprot/Q03506 Q03506]
 +
** [http://www.uniprot.org/uniprot/Q23892 Q23892]
 +
** [http://www.uniprot.org/uniprot/Q9CFI7 Q9CFI7]
 +
** [http://www.uniprot.org/uniprot/P22507 P22507]
 +
** [http://www.uniprot.org/uniprot/P33363 P33363]
 +
** [http://www.uniprot.org/uniprot/Q9WXN2 Q9WXN2]
 +
** [http://www.uniprot.org/uniprot/Q9CFL0 Q9CFL0]
 +
** [http://www.uniprot.org/uniprot/Q9CJ31 Q9CJ31]
 +
** [http://www.uniprot.org/uniprot/P12614 P12614]
 +
** [http://www.uniprot.org/uniprot/P06835 P06835]
 +
** [http://www.uniprot.org/uniprot/P26205 P26205]
 +
** [http://www.uniprot.org/uniprot/P26204 P26204]
 +
** [http://www.uniprot.org/uniprot/P07337 P07337]
 +
** [http://www.uniprot.org/uniprot/Q8X8G6 Q8X8G6]
 +
** [http://www.uniprot.org/uniprot/Q12653 Q12653]
 +
** [http://www.uniprot.org/uniprot/P48825 P48825]
 +
** [http://www.uniprot.org/uniprot/P94248 P94248]
 +
** [http://www.uniprot.org/uniprot/O24749 O24749]
 +
** [http://www.uniprot.org/uniprot/Q9SPK3 Q9SPK3]
 +
** [http://www.uniprot.org/uniprot/P22073 P22073]
 +
** [http://www.uniprot.org/uniprot/P22505 P22505]
 +
** [http://www.uniprot.org/uniprot/P96316 P96316]
 +
** [http://www.uniprot.org/uniprot/P10482 P10482]
 +
** [http://www.uniprot.org/uniprot/P14002 P14002]
 +
** [http://www.uniprot.org/uniprot/P15885 P15885]
 +
** [http://www.uniprot.org/uniprot/P26208 P26208]
 +
** [http://www.uniprot.org/uniprot/Q41172 Q41172]
 +
** [http://www.uniprot.org/uniprot/Q7M0Q7 Q7M0Q7]
 +
** [http://www.uniprot.org/uniprot/Q08638 Q08638]
 +
** [http://www.uniprot.org/uniprot/Q9S9H4 Q9S9H4]
 +
** [http://www.uniprot.org/uniprot/Q59976 Q59976]
 +
** [http://www.uniprot.org/uniprot/Q59437 Q59437]
 +
** [http://www.uniprot.org/uniprot/Q42618 Q42618]
 +
** [http://www.uniprot.org/uniprot/Q42975 Q42975]
 +
** [http://www.uniprot.org/uniprot/Q40984 Q40984]
 +
** [http://www.uniprot.org/uniprot/Q43073 Q43073]
 +
** [http://www.uniprot.org/uniprot/O82074 O82074]
 +
** [http://www.uniprot.org/uniprot/O24524 O24524]
 +
** [http://www.uniprot.org/uniprot/Q8CJM3 Q8CJM3]
 +
** [http://www.uniprot.org/uniprot/Q9X9R4 Q9X9R4]
 +
** [http://www.uniprot.org/uniprot/O68843 O68843]
 +
** [http://www.uniprot.org/uniprot/O82772 O82772]
 +
** [http://www.uniprot.org/uniprot/O49117 O49117]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=malate dehydrogenase (decarboxylating) (NAD+)}}
+
{{#set: common name=Beta-glucosidase, family GH1}}
−
{{#set: ec number=EC-1.1.1.38}}
+
{{#set: common name=Beta-glucosidase, family GH3}}
−
{{#set: ec number=EC-4.1.1.3}}
+
{{#set: common name=Beta-glucosidase, family GH30}}
−
{{#set: gene associated=Ec-01_003680|Ec-07_002070|Ec-07_002060}}
+
{{#set: ec number=EC-3.2.1.21}}
−
{{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|PWY-6339|P184-PWY}}
+
{{#set: gene associated=Ec-26_002410|Ec-04_002190|Ec-20_004800|Ec-07_005240|Ec-07_001850}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction 3.2.1.21-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-glucosidase, family GH1
    • Beta-glucosidase, family GH3
    • Beta-glucosidase, family GH30
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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