Difference between revisions of "RXN0-308"

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(Created page with "Category:Gene == Gene Ec-00_002470 == * left end position: ** 2717422 * transcription direction: ** NEGATIVE * right end position: ** 2718908 * centisome position: ** 14.3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V doma...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-00_002470 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
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* left end position:
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* direction:
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** 2717422
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Aminotransferase class V domain
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* right end position:
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** Cysteine desulfurase
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** 2718908
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** 14.342658   
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* Synonym(s):
 
* Synonym(s):
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** Esi_1515_0001
 
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** Esi1515_0001
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GCVT-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
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* [[GLYCLEAV-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-21_005640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_000950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-21_003740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2717422}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
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{{#set: right end position=2718908}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=14.342658    }}
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{{#set: common name=Aminotransferase class V domain}}
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{{#set: common name=Esi_1515_0001|Esi1515_0001}}
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{{#set: common name=Cysteine desulfurase}}
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{{#set: reaction associated=GCVT-RXN}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: pathway associated=GLYCLEAV-PWY}}
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{{#set: gene associated=Ec-21_005640|Ec-22_000950|Ec-21_003740}}
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{{#set: in pathway=PWY0-1021|PWY-6823|PWY-6892|PWY-6891}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN0-308

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminotransferase class V domain
    • Cysteine desulfurase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1021, L-alanine biosynthesis III: PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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