Difference between revisions of "Ec-16 001260"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GMP synthase...")
(Created page with "Category:Gene == Gene Ec-16_001260 == * left end position: ** 1402802 * transcription direction: ** POSITIVE * right end position: ** 1407748 * centisome position: ** 26.2...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] ==
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== Gene Ec-16_001260 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1402802
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* common name:
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* transcription direction:
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** GMP synthase (glutamine-hydrolyzing)
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2]
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** 1407748
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* centisome position:
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** 26.281246   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0194_0049
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** Esi0194_0049
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** CRY1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN]]
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** 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* With common name(s):
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** 1 XMP[c] '''+''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 2 H+[c] '''+''' 1 GMP[c] '''+''' 1 L-glutamate[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-13_002710]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1402802}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1407748}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
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{{#set: centisome position=26.281246    }}
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* UNIPROT:
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{{#set: common name=Esi_0194_0049|Esi0194_0049|CRY1}}
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** [http://www.uniprot.org/uniprot/P32073 P32073]
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{{#set: reaction associated=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN}}
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** [http://www.uniprot.org/uniprot/P49915 P49915]
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** [http://www.uniprot.org/uniprot/O25165 O25165]
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** [http://www.uniprot.org/uniprot/Q58531 Q58531]
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** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
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** [http://www.uniprot.org/uniprot/P29727 P29727]
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** [http://www.uniprot.org/uniprot/O66601 O66601]
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** [http://www.uniprot.org/uniprot/P49056 P49056]
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** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
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** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
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** [http://www.uniprot.org/uniprot/P44335 P44335]
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** [http://www.uniprot.org/uniprot/P38625 P38625]
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** [http://www.uniprot.org/uniprot/P49057 P49057]
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** [http://www.uniprot.org/uniprot/P04079 P04079]
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** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=GMP synthase (glutamine-hydrolyzing)}}
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{{#set: ec number=EC-6.3.5.2}}
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{{#set: gene associated=Ec-13_002710}}
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{{#set: in pathway=PWY-7221}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Gene Ec-16_001260

  • left end position:
    • 1402802
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1407748
  • centisome position:
    • 26.281246
  • Synonym(s):
    • Esi_0194_0049
    • Esi0194_0049
    • CRY1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_001260&oldid=29820"