Difference between revisions of "Ec-21 002920"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Ec-21_002920 == * left end position: ** 3964445 * transcription direction: ** POSITIVE * right end position: ** 3978722 * centisome position: ** 53.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
+
== Gene Ec-21_002920 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3964445
−
* common name:
+
* transcription direction:
−
** FAD-dependent pyridine nucleotide-disulphide oxidoreductase
+
** POSITIVE
−
** Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
+
* right end position:
−
** Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
+
** 3978722
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
+
** 53.7179   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0387_0012
 +
** Esi0387_0012
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ADPREDUCT-RXN]]
−
** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[NADP]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 an oxidized thioredoxin[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a reduced thioredoxin[c] '''+''' 1 NADP+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-19_001510]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-02_005330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-19_004520]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
*** Tool: [[pantograph]]
+
* Reaction: [[CDPREDUCT-RXN]]
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[GDPREDUCT-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-722]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-747]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[RXN0-748]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
* Reaction: [[UDPREDUCT-RXN]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: go-term
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-7210]]
 +
* [[PWY-7198]]
 +
* [[PWY-7220]]
 +
* [[PWY-7184]]
 +
* [[PWY-7222]]
 +
* [[PWY0-166]]
 +
* [[PWY-7227]]
 +
* [[PWY-7226]]
 +
* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3964445}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3978722}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
+
{{#set: centisome position=53.7179    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0387_0012|Esi0387_0012}}
−
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
+
{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
−
** [http://www.uniprot.org/uniprot/P56431 P56431]
+
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
−
** [http://www.uniprot.org/uniprot/O28718 O28718]
+
−
** [http://www.uniprot.org/uniprot/P80880 P80880]
+
−
** [http://www.uniprot.org/uniprot/P43496 P43496]
+
−
** [http://www.uniprot.org/uniprot/P94284 P94284]
+
−
** [http://www.uniprot.org/uniprot/O66790 O66790]
+
−
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
+
−
** [http://www.uniprot.org/uniprot/P47348 P47348]
+
−
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
+
−
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
+
−
** [http://www.uniprot.org/uniprot/O26804 O26804]
+
−
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
+
−
** [http://www.uniprot.org/uniprot/P43788 P43788]
+
−
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
+
−
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
+
−
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
+
−
** [http://www.uniprot.org/uniprot/P23160 P23160]
+
−
** [http://www.uniprot.org/uniprot/P39916 P39916]
+
−
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
+
−
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
+
−
** [http://www.uniprot.org/uniprot/P38816 P38816]
+
−
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
+
−
** [http://www.uniprot.org/uniprot/P29509 P29509]
+
−
** [http://www.uniprot.org/uniprot/P52213 P52213]
+
−
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
+
−
** [http://www.uniprot.org/uniprot/P75531 P75531]
+
−
** [http://www.uniprot.org/uniprot/P74746 P74746]
+
−
** [http://www.uniprot.org/uniprot/P46843 P46843]
+
−
** [http://www.uniprot.org/uniprot/O54535 O54535]
+
−
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
+
−
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
+
−
** [http://www.uniprot.org/uniprot/P52215 P52215]
+
−
** [http://www.uniprot.org/uniprot/P51978 P51978]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=FAD-dependent pyridine nucleotide-disulphide oxidoreductase}}
+
−
{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain}}
+
−
{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain}}
+
−
{{#set: ec number=EC-1.8.1.9}}
+
−
{{#set: gene associated=Ec-19_001510|Ec-02_005330|Ec-19_004520}}
+
−
{{#set: in pathway=THIOREDOX-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:55, 21 March 2018

Gene Ec-21_002920

  • left end position:
    • 3964445
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978722
  • centisome position:
    • 53.7179
  • Synonym(s):
    • Esi_0387_0012
    • Esi0387_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_002920&oldid=30256"