Difference between revisions of "DCMP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O * inchi key: **...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
 +
* inchi key:
 +
** InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
 
* common name:
 
* common name:
−
** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
+
** dCMP
−
** Dehydrogenase, E1 component
+
* molecular weight:
−
* ec number:
+
** 305.183   
−
** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 2'-deoxycytidine 5'-monophosphate
 +
** deoxycytidylate
 +
** deoxycytidylic acid
 +
** deoxycytidine monophosphate
 +
** 2'-deoxycytidine 5'-phosphate
 +
** deoxycytidine-phosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-7913]]
−
** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c]
+
* [[DCMP-DEAMINASE-RXN]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c]
+
* [[RXN-14187]]
−
 
+
* [[RXN-14198]]
−
== Genes associated with this reaction  ==
+
== Reaction(s) of unknown directionality ==
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-10_006360]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* CAS : 1032-65-1
−
** [http://www.uniprot.org/uniprot/P21839 P21839]
+
* BIGG : 34352
−
** [http://www.uniprot.org/uniprot/P21953 P21953]
+
* PUBCHEM:
−
** [http://www.uniprot.org/uniprot/P37940 P37940]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058169 7058169]
−
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
+
* HMDB : HMDB01202
−
** [http://www.uniprot.org/uniprot/P37941 P37941]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P11178 P11178]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00239 C00239]
−
** [http://www.uniprot.org/uniprot/P12694 P12694]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P09061 P09061]
+
** [http://www.chemspider.com/Chemical-Structure.5414501.html 5414501]
−
** [http://www.uniprot.org/uniprot/P09060 P09060]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P11960 P11960]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57566 57566]
−
** [http://www.uniprot.org/uniprot/O84344 O84344]
+
* METABOLIGHTS : MTBLC57566
−
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
+
{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O}}
−
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
+
{{#set: inchi key=InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L}}
−
** [http://www.uniprot.org/uniprot/P35738 P35738]
+
{{#set: common name=dCMP}}
−
** [http://www.uniprot.org/uniprot/P50136 P50136]
+
{{#set: molecular weight=305.183    }}
−
** [http://www.uniprot.org/uniprot/O48615 O48615]
+
{{#set: common name=2'-deoxycytidine 5'-monophosphate|deoxycytidylate|deoxycytidylic acid|deoxycytidine monophosphate|2'-deoxycytidine 5'-phosphate|deoxycytidine-phosphate}}
−
** [http://www.uniprot.org/uniprot/O03849 O03849]
+
{{#set: consumed by=RXN-7913|DCMP-DEAMINASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
+
{{#set: produced by=RXN-14187|RXN-14198}}
−
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
+
−
** [http://www.uniprot.org/uniprot/O82450 O82450]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
+
−
{{#set: common name=Dehydrogenase, E1 component}}
+
−
{{#set: ec number=EC-1.2.4.4}}
+
−
{{#set: gene associated=Ec-10_006360}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:35, 21 March 2018

Metabolite DCMP

  • smiles:
    • C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
  • inchi key:
    • InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
  • common name:
    • dCMP
  • molecular weight:
    • 305.183
  • Synonym(s):
    • 2'-deoxycytidine 5'-monophosphate
    • deoxycytidylate
    • deoxycytidylic acid
    • deoxycytidine monophosphate
    • 2'-deoxycytidine 5'-phosphate
    • deoxycytidine-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 1032-65-1
  • BIGG : 34352
  • PUBCHEM:
  • HMDB : HMDB01202
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57566
"C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DCMP&oldid=27949"