Difference between revisions of "ADENODEAMIN-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/AMP d...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-lysine biosynthesis III
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** Adenosine/AMP deaminase domain
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** adenosine deaminase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''6''' reaction(s) found
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* With identifiers:
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** [[RXN-14014]]
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** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
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** [[ASPARTATEKIN-RXN]]
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* With common name(s):
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** [[DIHYDRODIPICSYN-RXN]]
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** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 inosine[c]
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** [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** [[RXN-4821]]
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== Genes associated with this reaction  ==
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** [[DIAMINOPIMDECARB-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Ec-00_010560]]
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* '''1''' reaction(s) not found
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** Source: [[annotation-esiliculosus_genome]]
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** [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMELATE-DEHYDROGENASE-RXN DIAMINOPIMELATE-DEHYDROGENASE-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_003130]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
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** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=L-lysine biosynthesis III}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
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{{#set: reaction found=6}}
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* LIGAND-RXN:
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{{#set: reaction not found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P22333 P22333]
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** [http://www.uniprot.org/uniprot/P00813 P00813]
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** [http://www.uniprot.org/uniprot/P03958 P03958]
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** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
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** [http://www.uniprot.org/uniprot/P55266 P55266]
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** [http://www.uniprot.org/uniprot/P53984 P53984]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Adenosine/AMP deaminase domain}}
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{{#set: common name=adenosine deaminase}}
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{{#set: ec number=EC-3.5.4.4}}
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{{#set: gene associated=Ec-00_010560|Ec-04_003130}}
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{{#set: in pathway=PWY0-1296|PWY-6609|SALVADEHYPOX-PWY|PWY-6611}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:24, 21 March 2018

Reaction ADENODEAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenosine/AMP deaminase domain
    • adenosine deaminase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 adenosine[c] + 1 H+[c] + 1 H2O[c] => 1 ammonium[c] + 1 inosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1296, purine ribonucleosides degradation: PWY0-1296
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III: PWY-6609
    • 3 reactions found over 4 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6611, adenine and adenosine salvage V: PWY-6611
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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