Difference between revisions of "PROLINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/4....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Anticodon-binding
 +
** Proline--tRNA ligase, central part
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1 EC-4.1.1]
+
** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ETHANOL-AMINE]][c]
+
** 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-PRO-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 L-serine[c] '''=>''' 1 CO2[c] '''+''' 1 ethanolamine[c]
+
** 1 a tRNApro[c] '''+''' 1 L-proline[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-prolyl-[tRNApro][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-26_002190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-08_005570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY4FS-6]], phosphatidylethanolamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-6 PWY4FS-6]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-3385]], choline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3385 PWY-3385]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O51363 O51363]
 +
** [http://www.uniprot.org/uniprot/O58734 O58734]
 +
** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
 +
** [http://www.uniprot.org/uniprot/P43830 P43830]
 +
** [http://www.uniprot.org/uniprot/P47525 P47525]
 +
** [http://www.uniprot.org/uniprot/O26708 O26708]
 +
** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
 +
** [http://www.uniprot.org/uniprot/Q58635 Q58635]
 +
** [http://www.uniprot.org/uniprot/P56124 P56124]
 +
** [http://www.uniprot.org/uniprot/O83195 O83195]
 +
** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
 +
** [http://www.uniprot.org/uniprot/O31755 O31755]
 +
** [http://www.uniprot.org/uniprot/P36431 P36431]
 +
** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
 +
** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
 +
** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
 +
** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
 +
** [http://www.uniprot.org/uniprot/P75382 P75382]
 +
** [http://www.uniprot.org/uniprot/Q49090 Q49090]
 +
** [http://www.uniprot.org/uniprot/P07814 P07814]
 +
** [http://www.uniprot.org/uniprot/P16659 P16659]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.1}}
+
{{#set: common name=Anticodon-binding}}
−
{{#set: in pathway=PWY-7782|PWY4FS-6|PWY-3385}}
+
{{#set: common name=Proline--tRNA ligase, central part}}
 +
{{#set: ec number=EC-6.1.1.15}}
 +
{{#set: gene associated=Ec-26_002190|Ec-08_005570}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:31, 21 March 2018

Reaction PROLINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Anticodon-binding
    • Proline--tRNA ligase, central part
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNApro[c] + 1 L-proline[c] + 1 ATP[c] + 1 H+[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-prolyl-[tRNApro][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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