Difference between revisions of "RXN0-308"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-16_001570 == * left end position: ** 1828807 * transcription direction: ** NEGATIVE * right end position: ** 1829982 * centisome position: ** 34.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V doma...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-16_001570 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
−
* left end position:
+
* direction:
−
** 1828807
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** Aminotransferase class V domain
−
* right end position:
+
** Cysteine desulfurase
−
** 1829982
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
−
** 34.262375   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0047_0145
 
−
** Esi0047_0145
 
−
** HDC
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[HISTIDINE-DECARBOXYLASE-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[aragem]]
+
** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
−
== Pathways associated ==
+
 
−
* [[PWY-6173]]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-21_005640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-22_000950]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-21_003740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1828807}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
−
{{#set: right end position=1829982}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=34.262375    }}
+
{{#set: common name=Aminotransferase class V domain}}
−
{{#set: common name=Esi_0047_0145|Esi0047_0145|HDC}}
+
{{#set: common name=Cysteine desulfurase}}
−
{{#set: reaction associated=HISTIDINE-DECARBOXYLASE-RXN}}
+
{{#set: ec number=EC-2.8.1.7}}
−
{{#set: pathway associated=PWY-6173}}
+
{{#set: gene associated=Ec-21_005640|Ec-22_000950|Ec-21_003740}}
 +
{{#set: in pathway=PWY0-1021|PWY-6823|PWY-6892|PWY-6891}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN0-308

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminotransferase class V domain
    • Cysteine desulfurase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1021, L-alanine biosynthesis III: PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-308&oldid=28731"