Difference between revisions of "RXN-16136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] == * direction: ** REVERSIBLE * common name: ** Pectin lyase fold * ec n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16136 RXN-16136] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
* common name:
+
** Pectin lyase fold
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.2.2.10 EC-4.2.2.10]
+
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Pectin]][c] '''<=>''' n [[CPD-12980]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-17387]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-17388]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a pectin[c] '''<=>''' n an oligosaccharide with 4-deoxy-6-O-methyl-&alpha;-D-galact-4-enuronate end[c]
+
** 1 NAD+[c] '''+''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-08_000940]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000930]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_000350]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_009490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-23_004040]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000920]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002310]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_006370]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-02_001160]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_003140]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000860]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-20_003100]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-25_001080]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_001490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-20_003120]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_004740]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-02_001170]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-18_004360]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002640]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002650]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-09_004230]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_011490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_010800]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_001360]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002330]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-09_004260]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-04_001770]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_000190]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-12_000410]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[annotation]]
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.uniprot.org/uniprot/Q47512 Q47512]
+
{{#set: ec number=EC-1.1.1}}
** [http://www.uniprot.org/uniprot/Q02726 Q02726]
+
{{#set: in pathway=PWY-7606}}
** [http://www.uniprot.org/uniprot/P22864 P22864]
+
** [http://www.uniprot.org/uniprot/P24112 P24112]
+
** [http://www.uniprot.org/uniprot/P27027 P27027]
+
** [http://www.uniprot.org/uniprot/Q01172 Q01172]
+
** [http://www.uniprot.org/uniprot/Q12639 Q12639]
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Pectin lyase fold}}
+
{{#set: ec number=EC-4.2.2.10}}
+
{{#set: gene associated=Ec-08_000940|Ec-08_000930|Ec-14_000350|Ec-00_009490|Ec-23_004040|Ec-08_000920|Ec-13_002310|Ec-00_006370|Ec-02_001160|Ec-21_003140|Ec-08_000860|Ec-20_003100|Ec-25_001080|Ec-21_001490|Ec-20_003120|Ec-14_004740|Ec-02_001170|Ec-18_004360|Ec-13_002640|Ec-13_002650|Ec-09_004230|Ec-00_011490|Ec-00_010800|Ec-21_001360|Ec-13_002330|Ec-09_004260|Ec-04_001770|Ec-14_000190|Ec-12_000410}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:55, 21 March 2018

Reaction RXN-16136

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] => 1 H+[c] + 1 NADH[c] + 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links