Difference between revisions of "RXN-902"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain ** B...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pelargonidin conjugates biosynthesis
+
** ClpP/crotonase-like domain
 +
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-7828]]
+
** 1 [[E-PHENYLITACONYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Ec-28_003310]]
+
** 1 (E)-2-benzylidenesuccinyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c]
−
*** [[Ec-14_000870]]
+
 
−
*** [[Ec-04_004610]]
+
== Genes associated with this reaction  ==
−
** 1 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-aragem]]
+
* Gene: [[Ec-06_001380]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7830 RXN-7830]
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7832 RXN-7832]
+
* Gene: [[Ec-16_003560]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7834 RXN-7834]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7997 RXN-7997]
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7998 RXN-7998]
+
* Gene: [[Ec-16_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-3398}}
+
* LIGAND-RXN:
−
{{#set: common name=pelargonidin conjugates biosynthesis}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
−
{{#set: reaction found=1}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: total reaction=6}}
+
{{#set: common name=ClpP/crotonase-like domain}}
−
{{#set: completion rate=17.0}}
+
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-06_001380|Ec-16_003560|Ec-16_001250|Ec-14_006530}}
 +
{{#set: in pathway=PWY-81}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:04, 21 March 2018

Reaction RXN-902

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-81, toluene degradation to benzoyl-CoA (anaerobic): PWY-81
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-902&oldid=24367"