Difference between revisions of "RXN-9386"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9386 RXN-9386] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribosomal protein L25/Gln-tRN...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9386 RXN-9386] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-tryptophan degradation XI (mammalian, via kynurenine)
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** Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
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** Glutamyl-tRNA Synthetase, chloroplast precursor
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.24 EC-6.1.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[2.6.1.7-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-00_001230]]
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** 1 L-glutamate[c] '''+''' 1 H+[c] '''+''' 1 a tRNAgln[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-glutamyl-[tRNAGln][c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 3 associated gene(s):
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* Gene: [[Ec-06_008480]]
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*** [[Ec-26_002430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_001830]]
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*** Assignment: EC-NUMBER
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*** [[Ec-28_001680]]
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* Gene: [[Ec-15_002360]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* [[PWY-5651]]
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== Pathways  ==
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** 0 associated gene:
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* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5921 PWY-5921]
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* [[PWY-5652]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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* [[RXN-10720]]
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* Category: [[annotation]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10721]]
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** 1 associated gene(s):
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*** [[Ec-00_001230]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10722]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-8665]]
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** 1 associated gene(s):
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*** [[Ec-20_001720]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=KYNURENINASE-RXN KYNURENINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-40674}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
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{{#set: common name=Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain}}
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{{#set: reaction found=8}}
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{{#set: common name=Glutamyl-tRNA Synthetase, chloroplast precursor}}
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{{#set: total reaction=17}}
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{{#set: ec number=EC-6.1.1.24}}
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{{#set: completion rate=47.0}}
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{{#set: gene associated=Ec-06_008480|Ec-15_002360}}
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{{#set: in pathway=PWY-5921}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-9386

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
    • Glutamyl-tRNA Synthetase, chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 H+[c] + 1 a tRNAgln[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-glutamyl-[tRNAGln][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation: PWY-5921
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9386&oldid=24509"